Interactive three-dimensional visualization and contextual analysis of protein interaction networks.

@article{Ho2008InteractiveTV,
  title={Interactive three-dimensional visualization and contextual analysis of protein interaction networks.},
  author={Edwin H. L. Ho and Richard Webber and Marc R. Wilkins},
  journal={Journal of proteome research},
  year={2008},
  volume={7 1},
  pages={
          104-12
        }
}
To understand the biology of the interactome, the covisualization of protein interactions and other protein-related data is required. In this study, we have adapted a 3-D network visualization platform, GEOMI, to allow the coanalysis of protein-protein interaction networks with proteomic parameters such as protein localization, abundance, physicochemical parameters, post-translational modifications, and gene ontology classification. Working with Saccharomyces cerevisiae data, we show that rich… CONTINUE READING
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