Integration of Clustering and Multidimensional Scaling to Determine Phylogenetic Trees as Spherical Phylograms Visualized in 3 Dimensions

@article{Ruan2014IntegrationOC,
  title={Integration of Clustering and Multidimensional Scaling to Determine Phylogenetic Trees as Spherical Phylograms Visualized in 3 Dimensions},
  author={Yang Ruan and Geoffrey L. House and Saliya Ekanayake and Ursel Schutte and James D. Bever and Haixu Tang and Geoffrey Charles Fox},
  journal={2014 14th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing},
  year={2014},
  pages={720-729}
}
Phylogenetic analysis is commonly used to analyze genetic sequence data from fungal communities, while ordination and clustering techniques commonly are used to analyze sequence data from bacterial communities. However, few studies have attempted to link these two independent approaches. In this paper, we propose a method, which we call spherical phylogram (SP), to display the phylogenetic tree within the clustering and visualization result from a pipeline called DACIDR. In comparison with… Expand
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