Indel-II region deletion sizes in the white spot syndrome virus genome correlate with shrimp disease outbreaks in southern Vietnam.

@article{Hoa2012IndelIIRD,
  title={Indel-II region deletion sizes in the white spot syndrome virus genome correlate with shrimp disease outbreaks in southern Vietnam.},
  author={Trần Thị Tuyết Hoa and Mark P. Zwart and Nguyễn Thị Thu Phương and Dang Thi Hoang Oanh and Mart C M de Jong and Just M. Vlak},
  journal={Diseases of aquatic organisms},
  year={2012},
  volume={99 2},
  pages={
          153-62
        }
}
Sequence comparisons of the genomes of white spot syndrome virus (WSSV) strains have identified regions containing variable-length insertions/deletions (i.e. indels). Indel-I and Indel-II, positioned between open reading frames (ORFs) 14/15 and 23/24, respectively, are the largest and the most variable. Here we examined the nature of these 2 indel regions in 313 WSSV-infected Penaeus monodon shrimp collected between 2006 and 2009 from 76 aquaculture ponds in the Mekong Delta region of Vietnam… CONTINUE READING

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