Increasing the number of single nucleotide polymorphisms used in genomic evaluation of dairy cattle.

@article{Wiggans2014IncreasingTN,
  title={Increasing the number of single nucleotide polymorphisms used in genomic evaluation of dairy cattle.},
  author={George R. Wiggans and Thomas A Cooper and Paul M. Vanraden and Curtis P Van Tassell and Derek M. Bickhart and Tad S. Sonstegard},
  journal={Journal of dairy science},
  year={2014},
  volume={99 6},
  pages={
          4504-4511
        }
}
GeneSeek (Neogen Corp., Lexington, KY) designed a new version of the GeneSeek Genomic Profiler HD BeadChip for Dairy Cattle, which originally had >77,000 single nucleotide polymorphisms (SNP). A set of >140,000 SNP was selected that included all SNP on the existing GeneSeek chip, all SNP used in US national genomic evaluations, SNP that were possible functional mutations, and other informative SNP. Because SNP with a lower minor allele frequency might track causative variants better, 30,000… CONTINUE READING
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