Improving Gene-finding in Chlamydomonas reinhardtii:GreenGenie2

  title={Improving Gene-finding in Chlamydomonas reinhardtii:GreenGenie2},
  author={Alan L. Kwan and Linya Li and David Kulp and Susan K. Dutcher and Gary D. Stormo},
  journal={BMC Genomics},
  pages={210 - 210}
The availability of whole-genome sequences allows for the identification of the entire set of protein coding genes as well as their regulatory regions. This can be accomplished using multiple complementary methods that include ESTs, homology searches and ab initio gene predictions. Previously, the Genie gene-finding algorithm was trained on a small set of Chlamydomonas genes and shown to improve the accuracy of gene prediction in this species compared to other available programs. To improve ab… CONTINUE READING
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