Improvement of the banana “Musa acuminata” reference sequence using NGS data and semi-automated bioinformatics methods

@article{Martin2016ImprovementOT,
  title={Improvement of the banana “Musa acuminata” reference sequence using NGS data and semi-automated bioinformatics methods},
  author={Guillaume Martin and Franc-Christophe Baurens and Ga{\"e}tan Droc and Mathieu Rouard and Alberto Cenci and Andrzej Kilian and Alex R Hastie and Jaroslav Dole{\vz}el and Jean-Marc Aury and Adriana Alberti and Françoise Carreel and Ang{\'e}lique D’Hont},
  journal={BMC Genomics},
  year={2016},
  volume={17},
  pages={1-12}
}
Recent advances in genomics indicate functional significance of a majority of genome sequences and their long range interactions. As a detailed examination of genome organization and function requires very high quality genome sequence, the objective of this study was to improve reference genome assembly of banana (Musa acuminata). We have developed a modular bioinformatics pipeline to improve genome sequence assemblies, which can handle various types of data. The pipeline comprises several semi… CONTINUE READING
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