Hybrid Computation Models for High Performance Biological Sequence Alignment on a Cloud System

@inproceedings{Job2015HybridCM,
  title={Hybrid Computation Models for High Performance Biological Sequence Alignment on a Cloud System},
  author={Taylor N. Job and Jin Hyun Park},
  year={2015}
}
As a convenient high performance computation system, cloud system is more and more popularly used in the field of bioinformatics. We develop and examine several hybrid computation models for high performance biological sequence alignment on a cloud system. In our practice, Smith-Waterman and CloudBurst alignment algorithms are evaluated for performance with the computation models, which are built from combinations of current technologies including Hadoop, SHadoop and Fair Scheduler, on the… CONTINUE READING

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