• Corpus ID: 49405632

How to Read a Research Compendium

  title={How to Read a Research Compendium},
  author={Daniel N{\"u}st and Carl Boettiger and Ben Marwick},
Researchers spend a great deal of time reading research papers. Keshav (2012) provides a three-pass method to researchers to improve their reading skills. This article extends Keshav's method for reading a research compendium. Research compendia are an increasingly used form of publication, which packages not only the research paper's text and figures, but also all data and software for better reproducibility. We introduce the existing conventions for research compendia and suggest how to… 

Reproducible Research is like riding a bike

The approach taken to put Reproducible Research in the agenda of the GIScience community is outlined, first actions and initial lessons learned towards the discussion and adoption of RR principles and practices in the workflows and habits of researchers are presented and a short-term strategy is presented.

Challenges of Curating for Reproducible and FAIR Research Output

This report represents the CURE-FAIR WG’s first milestone toward the final deliverable: CURE -FAIR survey of current state, and describes the challenges of preparing and reusing materials required for computational reproducibility.

Reproducibility, preservation, and access to research with ReproZip and ReproServer

How ReproZip and the new tool, ReproServer, can be used together to facilitate access to well-preserved, reproducible work is discussed.

Learning from reproducing computational results: introducing three principles and the Reproduction Package

A novel Reproduction Package is defined, a formalism that specifies a structured way to share computational research artifacts that implements the guidelines generated from the reproduction efforts to allow others to build, reproduce and extend computational science.

Practical Reproducibility in Geography and Geosciences

It is argued that all researchers working with computers should understand these technologies to control their computing environment, and the benefits of reproducible workflows in practice are presented.

REPRODUCIBILITY AND REPLICABILITY FORUM Practical Reproducibility in Geography and Geosciences Reproducible workflows in geography and geosciences

It is argued that all researchers working with computers should understand these technologies to control their computing environment, and it is concluded that researchers today can overcome many barriers and achieve a very high degree of reproducibility.

Reproducibilidad científica: ¿Qué es y por qué debemos interesarnos en geo-ciencias?

A pesar de que en los últimos tiempos se ha resaltado la importancia de la reproducibilidad como pilar del proceso científico, en las geo-ciencias ésta no ha sido reconocida como una preocupación



Opening the Publication Process with Executable Research Compendia

It is concluded that ERCs provide a novel potential to find, explore, reuse, and archive computer-based research.

Good enough practices in scientific computing

A set of good computing practices that every researcher can adopt, regardless of their current level of computational skill are presented, which encompass data management, programming, collaborating with colleagues, organizing projects, tracking work, and writing manuscripts.

Best Practices for Computational Science: Software Infrastructure and Environments for Reproducible and Extensible Research

A formalized set of best practice recommendations for computational scientists wishing to disseminate reproducible research, facilitate innovation by enabling data and code re-use, and enable broader communication of the output of digital scientific research are presented.

Terminologies for Reproducible Research

By attempting to inventory the terminologies across disciplines, it is hoped that some patterns will emerge to help resolve the contradictions.

The Legal Framework for Reproducible Scientific Research: Licensing and Copyright

  • V. Stodden
  • Computer Science
    Computing in Science & Engineering
  • 2009
The author proposes the reproducible research standard for scientific researchers to use for all components of their scholarship that should encourage reproducible scientific investigation through attribution, facilitate greater collaboration, and promote engagement of the larger community in scientific learning and discovery.

Jupyter Notebooks - a publishing format for reproducible computational workflows

Jupyter notebooks, a document format for publishing code, results and explanations in a form that is both readable and executable, is presented.

Ten Simple Rules for Reproducible Computational Research

It is emphasized that reproducibility is not only a moral responsibility with respect to the scientific field, but that a lack of reproducible can also be a burden for you as an individual researcher.

Ten Simple Rules for the Open Development of Scientific Software

To make the development of open scientific software more rewarding and the experience of using software more positive, the following ten rules are intended to serve as a guide for any computational scientist.

Statistical Analyses and Reproducible Research

This article describes a software framework for both authoring and distributing integrated, dynamic documents that contain text, code, data, and any auxiliary content needed to recreate the computations in data analyses, methodological descriptions, simulations, and so on.

Computing Environments for Reproducibility: Capturing the "Whole Tale"