High-Throughput Sequencing of Six Bamboo Chloroplast Genomes: Phylogenetic Implications for Temperate Woody Bamboos (Poaceae: Bambusoideae)

  title={High-Throughput Sequencing of Six Bamboo Chloroplast Genomes: Phylogenetic Implications for Temperate Woody Bamboos (Poaceae: Bambusoideae)},
  author={Yun-Jie Zhang and P. Ma and D. Li},
  journal={PLoS ONE},
  • Yun-Jie Zhang, P. Ma, D. Li
  • Published 2011
  • Biology, Medicine
  • PLoS ONE
  • Background Bambusoideae is the only subfamily that contains woody members in the grass family, Poaceae. In phylogenetic analyses, Bambusoideae, Pooideae and Ehrhartoideae formed the BEP clade, yet the internal relationships of this clade are controversial. The distinctive life history (infrequent flowering and predominance of asexual reproduction) of woody bamboos makes them an interesting but taxonomically difficult group. Phylogenetic analyses based on large DNA fragments could only provide a… CONTINUE READING
    195 Citations
    Higher level phylogenetic relationships within the bamboos (Poaceae: Bambusoideae) based on five plastid markers.
    • S. Kelchner
    • Biology, Medicine
    • Molecular phylogenetics and evolution
    • 2013
    • 102
    Identification of putative orthologous genes for the phylogenetic reconstruction of temperate woody bamboos (Poaceae: Bambusoideae)
    • 8
    • PDF
    Chloroplast phylogenomic analyses resolve deep-level relationships of an intractable bamboo tribe Arundinarieae (poaceae).
    • 140
    • PDF
    Phylogenetic estimation and morphological evolution of Arundinarieae (Bambusoideae: Poaceae) based on plastome phylogenomic analysis.
    • 32
    • PDF
    Negative correlation between rates of molecular evolution and flowering cycles in temperate woody bamboos revealed by plastid phylogenomics
    • 7
    • PDF
    The draft genome of the fast-growing non-timber forest species moso bamboo (Phyllostachys heterocycla)
    • 286
    • PDF
    Multi-locus plastid phylogenetic biogeography supports the Asian hypothesis of the temperate woody bamboos (Poaceae: Bambusoideae).
    • 41
    • PDF
    The chloroplast genome of the hexaploid Spartina maritima (Poaceae, Chloridoideae): Comparative analyses and molecular dating.
    • 34
    • Highly Influenced


    Phylogeny of the Temperate Bamboos (Poaceae: Bambusoideae: Bambuseae) with an Emphasis on Arundinaria and Allies
    • 86
    • Highly Influential
    A Phylogeny of the Grass Family (Poaceae) Based on ndhF Sequence Data
    • 286
    Complete nucleotide sequence of Dendrocalamus latiflorus and Bambusa oldhamii chloroplast genomes.
    • 59
    • PDF
    Large multi-locus plastid phylogeny of the tribe Arundinarieae (Poaceae: Bambusoideae) reveals ten major lineages and low rate of molecular divergence.
    • 61
    Phylogeny of the grass family (Poaceae) from rpl16 intron sequence data.
    • W. Zhang
    • Biology, Medicine
    • Molecular phylogenetics and evolution
    • 2000
    • 79
    • Highly Influential
    Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns
    • 713
    • PDF
    Large multi-gene phylogenetic trees of the grasses (Poaceae): progress towards complete tribal and generic level sampling.
    • 203
    • Highly Influential
    The Complete Chloroplast Genome of Coix lacryma-jobi and a Comparative Molecular Evolutionary Analysis of Plastomes in Cereals
    • 52