Genetic analysis of group B human rotaviruses detected in Bangladesh in 2000 and 2001

@article{Ahmed2004GeneticAO,
  title={Genetic analysis of group B human rotaviruses detected in Bangladesh in 2000 and 2001},
  author={Muzahed Uddin Ahmed and Nobumichi Kobayashi and Mitsutaka Wakuda and Takeshi Sanekata and Koki Taniguchi and Abdul Kader and Trailokya Nath Naik and Masaho Ishino and Md Mahbub Alam and Kazunobu Kojima and Keiji Mise and Ayako Sumi},
  journal={Journal of Medical Virology},
  year={2004},
  volume={72}
}
Group B rotaviruses detected in Bangladesh in 2000 and 2001 were analyzed genetically to clarify relatedness to human group B rotaviruses reported previously in China and India, and to animal group B rotaviruses. VP7 gene sequences of the Bangladeshi group B rotaviruses (Bang373, Bang544, Bang334, and Bang402) were almost identical to each other and also showed high sequence identity to the Indian strain CAL‐1 (98%) and Chinese strain adult diarrhea rotavirus (ADRV) (92%), while identities to… 
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44 Citations
Background Citations
10
Methods Citations
5

44 Citations

Phylogenetic analysis of a human group B rotavirus WH‐1 detected in China in 2002
TLDR
The sequence divergence between WH‐1 and ADRV was estimated as 7.9 × 10−4 substitution/site per year, suggesting that the group B rotaviruses of Indian–Bangladeshi lineage diverged from that of Chinese lineage several decades ago.
Whole genomic characterization of a human rotavirus strain B219 belonging to a novel group of the genus rotavirus
TLDR
The basic structures of all B219 viral proteins are considered to be similar to those of the known rotavirus groups.
Analysis of genetic diversity and molecular evolution of human group B rotaviruses based on whole genome segments.
TLDR
Divergent or conserved regions in the deduced amino acid sequences of GBR VP1-VP4 and NSP1-NSP5 were similar to those in group A rotaviruses (GARs), and the functionally important motifs and structural characteristics in viral proteins known for GAR were conserved in all of the human GBRs.
Detection of group B rotavirus in an adult with acute gastroenteritis in Yangon, Myanmar
TLDR
Although the deduced amino acid sequences of MMR‐B1 were similar to those of strains CAL‐1 and Bang373, several amino acids in VP8* were found to be different from those of the group B rotavirus described previously.
Evidence for Occurrence of Human group B rotavirus in Central India Based on Characterization of NSP2 Gene
TLDR
It is indicated that MP-1 isolate might have originated from a common ancestral HuGBR virus but distinct from AnGBR lineage, and is closer to Bangladeshi (Bang373) as compared to Indian strain (CAL-1).
Molecular characterization of a human group C rotavirus detected first in Turkey
TLDR
The present study found that the Turkish group C rotavirus was unique and can serve as an additional reference strain for the molecular epidemiology of group CRotavirus in children with diarrhea presented at two major hospitals in Ankara, Turkey.
Distribution of two distinct rotavirus B (RVB) strains in the north-central Bangladesh and evidence for reassortment event among human RVB revealed by whole genomic analysis.
  • M. S. Aung, S. Nahar, N. Kobayashi
  • Biology
    Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases
  • 2017
Sequence analysis and evolution of group B rotaviruses.
Diversity in VP3, NSP3, and NSP4 of rotavirus B detected from Japanese cattle.
The Genome Segments of a Group D Rotavirus Possess Group A-Like Conserved Termini but Encode Group-Specific Proteins
TLDR
The first complete genome sequence of a group D rotavirus is presented, which was amplified using sequence-independent amplification strategies and degenerate primers and the nucleotide sequences at the termini of the 11 genome segments are identical between group D and group A rotaviruses.
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