GAAP: Genome-organization-framework-Assisted Assembly Pipeline for prokaryotic genomes

Abstract

Next-generation sequencing (NGS) technologies have greatly promoted the genomic study of prokaryotes. However, highly fragmented assemblies due to short reads from NGS are still a limiting factor in gaining insights into the genome biology. Reference-assisted tools are promising in genome assembly, but tend to result in false assembly when the assigned… (More)
DOI: 10.1186/s12864-016-3267-0

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