Frequent Substructure-Based Approaches for Classifying Chemical Compounds
@article{Deshpande2005FrequentSA, title={Frequent Substructure-Based Approaches for Classifying Chemical Compounds}, author={M. Deshpande and M. Kuramochi and N. Wale and G. Karypis}, journal={IEEE Trans. Knowl. Data Eng.}, year={2005}, volume={17}, pages={1036-1050} }
Computational techniques that build models to correctly assign chemical compounds to various classes of interest have many applications in pharmaceutical research and are used extensively at various phases during the drug development process. These techniques are used to solve a number of classification problems such as predicting whether or not a chemical compound has the desired biological activity, is toxic or nontoxic, and filtering out drug-like compounds from large compound libraries… CONTINUE READING
Topics from this paper
267 Citations
Chemical Compounds with Path Frequency Using Multi-Core Technology
- Computer Science
- Infoscale
- 2009
- Highly Influenced
A maximum common substructure-based algorithm for searching and predicting drug-like compounds
- Medicine, Computer Science
- ISMB
- 2008
- 114
- Highly Influenced
- PDF
Predicting activity approach based on new atoms similarity kernel function.
- Computer Science, Medicine
- Journal of molecular graphics & modelling
- 2015
- 4
Discriminative Chemical Patterns: Automatic and Interactive Design
- Computer Science, Medicine
- J. Chem. Inf. Model.
- 2015
- 7
Comparison of descriptor spaces for chemical compound retrieval and classification
- Mathematics, Computer Science
- Sixth International Conference on Data Mining (ICDM'06)
- 2006
- 299
- PDF
Chemical Compound Classification with Automatically Mined Structure Patterns
- Computer Science, Medicine
- APBC
- 2008
- 15
- PDF
Discovering Interesting Molecular Substructures for Molecular Classification
- Mathematics, Medicine
- IEEE Transactions on NanoBioscience
- 2010
- 4
GPM: A graph pattern matching kernel with diffusion for chemical compound classification
- Computer Science, Medicine
- 2008 8th IEEE International Conference on BioInformatics and BioEngineering
- 2008
- 38
- PDF
The Development of Novel Chemical Fragment‐Based Descriptors Using Frequent Common Subgraph Mining Approach and Their Application in QSAR Modeling
- Computer Science, Medicine
- Molecular informatics
- 2014
- 4
References
SHOWING 1-10 OF 76 REFERENCES
Frequent substructure-based approaches for classifying chemical compounds
- Computer Science
- IEEE Transactions on Knowledge and Data Engineering
- 2005
- 186
- PDF
Comparisons of classification methods for screening potential compounds
- Computer Science
- Proceedings 2001 IEEE International Conference on Data Mining
- 2001
- 13
- Highly Influential
Analysis of a Large Structure/Biological Activity Data Set Using Recursive Partitioning
- Computer Science, Medicine
- J. Chem. Inf. Comput. Sci.
- 1999
- 129
Mining molecular fragments: finding relevant substructures of molecules
- Computer Science
- 2002 IEEE International Conference on Data Mining, 2002. Proceedings.
- 2002
- 485
- Highly Influential
- PDF
Warmr: a data mining tool for chemical data
- Computer Science, Medicine
- J. Comput. Aided Mol. Des.
- 2001
- 80
Recursive Partitioning Analysis of a Large Structure-Activity Data Set Using Three-Dimensional Descriptors1
- Computer Science
- J. Chem. Inf. Comput. Sci.
- 1998
- 83
Analysis of Large Screening Data Sets via Adaptively Grown Phylogenetic-Like Trees
- Computer Science, Medicine
- J. Chem. Inf. Comput. Sci.
- 2002
- 42