FoldSynth is an interactive platform designed to help understand the characteristics and commonly used visual abstractions of molecular strands with an emphasis on proteins and DNA. It uses a simple model of molecularions of molecular strands with an emphasis on proteins and DNA. It uses a simple model of molecular forces to give real time interactive… (More)
Figure 4: Masks being used to selectively view the effects of different groups of contacts residues: (a) protein with only short secondary constraints disclosed by a mask (long rectangle near the main diagonal/bottom of matrix); (b) mask for another group of contacts brings parts of the protein together; (c) mask for another contact group; (d) remove mask in (b), to see the effect of just contact groups in (a) and (c); (e) extend the original mask found in (a) to disclose all contacts. (f) Fuller view at the GUI with menus.