FERN – a Java framework for stochastic simulation and evaluation of reaction networks

Abstract

Stochastic simulation can be used to illustrate the development of biological systems over time and the stochastic nature of these processes. Currently available programs for stochastic simulation, however, are limited in that they either a) do not provide the most efficient simulation algorithms and are difficult to extend, b) cannot be easily integrated… (More)
DOI: 10.1186/1471-2105-9-356

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