FACIL: Fast and Accurate Genetic Code Inference and Logo

  title={FACIL: Fast and Accurate Genetic Code Inference and Logo},
  author={Bas E. Dutilh and Rasa Jurgelenaite and Radek Szklarczyk and Sacha A. F. T. van Hijum and Harry R. Harhangi and Markus Schmid and Bart de Wild and Kees-Jan Françoijs and Henk Stunnenberg and Marc Strous and Mike S. M. Jetten and Huub J. M. Op den Camp and Martijn A. Huynen},
MOTIVATION The intensification of DNA sequencing will increasingly unveil uncharacterized species with potential alternative genetic codes. A total of 0.65% of the DNA sequences currently in Genbank encode their proteins with a variant genetic code, and these exceptions occur in many unrelated taxa. RESULTS We introduce FACIL (Fast and Accurate genetic Code Inference and Logo), a fast and reliable tool to evaluate nucleic acid sequences for their genetic code that detects alternative codes… CONTINUE READING
Related Discussions
This paper has been referenced on Twitter 1 time. VIEW TWEETS

From This Paper

Figures, tables, and topics from this paper.


Publications citing this paper.
Showing 1-9 of 9 extracted citations

Supplementary Methods 1 . 1 Protein sequence used as input for CoreTracker

Noutahi Emmanuel, Calderon Virginie, B. Mathieu, Lang B. Franz, El-Mabrouk Nadia

A new approach in pattern matching: Codon Detection in DNA and RNA using hash function (CDDRHF)

2015 18th International Conference on Computer and Information Technology (ICCIT) • 2015
View 1 Excerpt


Publications referenced by this paper.
Showing 1-10 of 19 references

short reads assembled on a desktop computer

E. V. Koonin, A. S. Novozhilov
Genome Res, • 2009
View 2 Excerpts

Forces maintaining organellar genomes: is any as strong as genetic code disparity or hydrophobicity?

BioEssays : news and reviews in molecular, cellular and developmental biology • 2005

Viral evolution and the emergence of SARS coronavirus.

Philosophical transactions of the Royal Society of London. Series B, Biological sciences • 2004

Similar Papers

Loading similar papers…