Explanatory Analysis of the Metabolome Using Genetic Programming of Simple, Interpretable Rules

@article{Johnson2000ExplanatoryAO,
  title={Explanatory Analysis of the Metabolome Using Genetic Programming of Simple, Interpretable Rules},
  author={Helen E. Johnson and Richard J. Gilbert and Michael K. Winson and Royston Goodacre and Aileen R. Smith and Jem J. Rowland and Michael A. Hall and Douglas B. Kell},
  journal={Genetic Programming and Evolvable Machines},
  year={2000},
  volume={1},
  pages={243-258}
}
Genetic programming, in conjunction with advanced analytical instruments, is a novel tool for the investigation of complex biological systems at the whole-tissue level. In this study, samples from tomato fruit grown hydroponically under both high- and low-salt conditions were analysed using Fourier-transform infrared spectroscopy (FTIR), with the aim of identifying spectral and biochemical features linked to salinity in the growth environment. FTIR spectra of whole tissue extracts are not… CONTINUE READING

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Key Quantitative Results

  • The GP derived expressions were capable of correctly classifying the examples in both the training and test data sets with an average accuracy of 88.9%.

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