• Corpus ID: 29174469

Evaluation of six single nucleotide polymorphisms for bovine traceability in the context of the argentine-chinese beef trade

@article{Ripoli2013EvaluationOS,
  title={Evaluation of six single nucleotide polymorphisms for bovine traceability in the context of the argentine-chinese beef trade},
  author={Mar{\'i}a Ver{\'o}nica Ripoli and S. Wei and Andres Rogberg Mu{\~n}oz and Boli Guo and Daniel Estanislao Goszczynski and Mar{\'i}a Elena Fern{\'a}ndez and Lilia Magdalena Melucci and Juan Pedro Lir{\'o}n and Edgardo Leopoldo Villarreal and Y. -M. Wei and Guillermo Giovambattista},
  journal={BAG. Journal of basic and applied genetics},
  year={2013},
  volume={24},
  pages={31-45}
}
Genetic traceability refers to methods associated with the identification of animals and their products through DNA characterization of individuals, breeds or species. To trace breeds, it is necessary to define the breed groups to analyze, and the most appropriate molecular marker set. The selection of genetic markers depends on the gene frequency distribution, the genetic distance among breeds and the presence of private alleles. In this study, we assessed six single nucleotide polymorphisms… 

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References

SHOWING 1-10 OF 64 REFERENCES
Comparison of Microsatellite and Single Nucleotide Polymorphism Markers for the Genetic Analysis of a Galloway Cattle Population
TLDR
Both, microsatellite and SNP sets of markers showed similar parental exclusion probabilities, and both were estimated to be over 99% for microsatellites, and 98% for SNP.
Development of a 25-plex SNP assay for traceability in cattle.
TLDR
The 25-plex SNaPshot assay is adapted for low- and high-throughput capacity and thus presents an alternative for DNA-based traceability in the major commercial cattle breeds.
History and selection imprinting on genetic relationships among bovine breeds analyzed trough five genes related with marbling.
Compilation of a panel of informative single nucleotide polymorphisms for bovine identification in the Northern Irish cattle population
TLDR
Minimal probabilities of uniquely identifying individual animals from each of the breeds were obtained and were observed to be superior to those conferred by the industry standard STR assay.
Selection and use of SNP markers for animal identification and paternity analysis in U.S. beef cattle
TLDR
This report describes a set of 32 highly informative SNP markers distributed among 18 autosomes and both sex chromosomes in U.S. beef cattle populations, which allow the design of robust, accurate genotype assays on a variety of high-throughput SNP genotyping platforms.
Effect of consanguinity on Argentinean Angus beef DNA traceability.
Genetic variation of mitochondrial D-loop region and evolution analysis in some Chinese cattle breeds.
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