Evaluating Summary Methods for Multilocus Species Tree Estimation in the Presence of Incomplete Lineage Sorting.

@article{Mirarab2016EvaluatingSM,
  title={Evaluating Summary Methods for Multilocus Species Tree Estimation in the Presence of Incomplete Lineage Sorting.},
  author={Siavash Mirarab and Md. Shamsuzzoha Bayzid and Tandy J. Warnow},
  journal={Systematic biology},
  year={2016},
  volume={65 3},
  pages={
          366-80
        }
}
Species tree estimation is complicated by processes, such as gene duplication and loss and incomplete lineage sorting (ILS), that cause discordance between gene trees and the species tree. Furthermore, while concatenation, a traditional approach to tree estimation, has excellent performance under many conditions, the expectation is that the best accuracy will be obtained through the use of species tree estimation methods that are specifically designed to address gene tree discordance. In this… CONTINUE READING
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