Estimation, variance and optimal sampling of gene diversity II. Diploid locus

@article{Pons2004EstimationVA,
  title={Estimation, variance and optimal sampling of gene diversity II. Diploid locus},
  author={O. Pons and K. Chaouche},
  journal={Theoretical and Applied Genetics},
  year={2004},
  volume={91},
  pages={122-130}
}
  • O. Pons, K. Chaouche
  • Published 2004
  • Biology, Medicine
  • Theoretical and Applied Genetics
  • Nei's analysis of diversity at a diploid locus is extended to a population subdivided into a large number of subpopulations. The diversities and the heterozygotes frequency are defined with respect to the total population and unbiasedly estimated in a two-stage random cluster sampling. The fixation indices FIS, FIT andFST are derived, then inter- and intra-population variances of the estimated parameters are studied. We show that there is a unique sample size per population which yields the… CONTINUE READING
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    References

    SHOWING 1-10 OF 20 REFERENCES
    Estimation, variance and optimal sampling of gene diversity
    • 260
    Analysis of gene diversity in subdivided populations.
    • M. Nei
    • Biology, Medicine
    • Proceedings of the National Academy of Sciences of the United States of America
    • 1973
    • 7,892
    • Highly Influential
    • PDF
    The analysis of population survey data on DNA sequence variation.
    • 524
    • PDF
    Sampling variances of heterozygosity and genetic distance.
    • 1,447
    Estimation of inbreeding parameters in stratified populations
    • 42
    F‐statistics and analysis of gene diversity in subdivided populations
    • M. Nei
    • Biology, Medicine
    • Annals of human genetics
    • 1977
    • 1,149
    Estimation of fixation indices and gene diversities
    • 827
    ESTIMATING F‐STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE
    • B. Weir, C. Cockerham
    • Biology, Medicine
    • Evolution; international journal of organic evolution
    • 1984
    • 16,141