Effective energy function for proteins in lipid membranes.

@article{Lazaridis2003EffectiveEF,
  title={Effective energy function for proteins in lipid membranes.},
  author={Themis Lazaridis},
  journal={Proteins},
  year={2003},
  volume={52 2},
  pages={
          176-92
        }
}
A simple extension of the EEF1 energy function to heterogeneous membrane-aqueous media is proposed. The extension consists of (a) development of solvation parameters for a nonpolar phase using experimental data for the transfer of amino acid side-chains from water to cyclohexane, (b) introduction of a heterogeneous membrane-aqueous system by making the reference solvation free energy of each atom dependent on the vertical coordinate, (c) a modification of the distance-dependent dielectric model… CONTINUE READING

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