Effect of the prior distribution of SNP effects on the estimation of total breeding value

@inproceedings{Nadaf2012EffectOT,
  title={Effect of the prior distribution of SNP effects on the estimation of total breeding value},
  author={Javad Nadaf and Valentina Riggio and Tun-Ping Yu and Ricardo Pong-Wong},
  booktitle={BMC proceedings},
  year={2012}
}
BACKGROUND Five main methods, commonly applied in genomic selection, were used to estimate the GEBV on the 15th QTLMAS workshop dataset: GBLUP, LASSO, Bayes A and two Bayes B type of methods (BBn and BBt). GBLUP is a mixed model approach where GEBV are obtained using a relationship matrix calculated from the SNP genotypes. The remaining methods are regression-based approaches where the SNP effects are first estimated and, then GEBV are calculated given the individuals' genotypes. METHODS The… CONTINUE READING
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