Discovering cis-Regulatory RNAs in Shewanella Genomes by Support Vector Machines

@article{Xu2009DiscoveringCR,
  title={Discovering cis-Regulatory RNAs in Shewanella Genomes by Support Vector Machines},
  author={Xing Xu and Yongmei Ji and Gary D. Stormo},
  journal={PLoS Computational Biology},
  year={2009},
  volume={5},
  pages={919 - 929}
}
An increasing number of cis-regulatory RNA elements have been found to regulate gene expression post-transcriptionally in various biological processes in bacterial systems. Effective computational tools for large-scale identification of novel regulatory RNAs are strongly desired to facilitate our exploration of gene regulation mechanisms and regulatory networks. We present a new computational program named RSSVM (RNA Sampler+Support Vector Machine), which employs Support Vector Machines (SVMs… CONTINUE READING
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