Diagnosis of mitogenome for robust phylogeny: A case of Cypriniformes fish group.

@article{Parhi2019DiagnosisOM,
  title={Diagnosis of mitogenome for robust phylogeny: A case of Cypriniformes fish group.},
  author={Janmejay Parhi and Partha Sarathi Tripathy and Himanshu Priyadarshi and Sagar Chandra Mandal and Pramod Kumar Pandey},
  journal={Gene},
  year={2019},
  pages={
          143967
        }
}
Mitochondrial Genome Structures and Phylogenetic Analyses of Two Tropical Characidae Fishes
TLDR
Determining the mitogenomes of H. erythrozonus and H. amandae improves the understanding of the phylogeny and evolution of fish species and provides a phylogenetic basis for improved classification of the family Characidae.
The mitogenome of freshwater loach Homatula laxiclathra (Teleostei: Nemacheilidae) with phylogenetic analysis of Nemacheilidae
TLDR
A stone loach, Homatula laxiclathra, found in the northern region of the Qinling Mountains in China is sequenced, which contains 37 typical mitochondrial genes including 13 protein‐coding genes, 22 transfer RNAs, two ribosomalRNAs, and a control region (D‐loop) with a total AT content of 55.8%.

References

SHOWING 1-10 OF 67 REFERENCES
Use of mitogenomic information in teleostean molecular phylogenetics: a tree-based exploration under the maximum-parsimony optimality criterion.
TLDR
It is concluded that judicious choice of mitochondrial genes and appropriate data weighting, in conjunction with purposeful taxonomic sampling, are prerequisites for resolving higher-level relationships in teleosts under the maximum-parsimony optimality criterion.
Mitogenomic Evolution and Interrelationships of the Cypriniformes (Actinopterygii: Ostariophysi): The First Evidence Toward Resolution of Higher-Level Relationships of the World’s Largest Freshwater Fish Clade Based on 59 Whole Mitogenome Sequences
TLDR
The present study represents the first attempt toward resolution of the higher-level relationships of the world’s largest freshwater-fish clade based on whole mitochondrial genome sequences from 53 cypriniforms plus 6 outgroups, and it is advocated that RY-coding, which takes only transversions into account, effectively removes this likely “noise” from the data set and avoids the apparent lack of signal by retaining all available positions in the dataSet.
Molecular systematics of Salmonidae: combined nuclear data yields a robust phylogeny.
Utility of Multi-Gene Loci for Forensic Species Diagnosis of Blowflies
TLDR
The utility of five gene segments was explored among blowfly species from two distinct geographic regions, China and Pakistan, and demonstrate a universal utility of these gene segments in the molecular identification of flies of forensic importance.
Mitochondrial DNA- a Tool for Phylogenetic and Biodiversity Search in Equines
TLDR
Many native breeds of horses as well as ponies were assessed for their genetic diversity and ancestry on the basis of studies on mitochondrial DNA to address the questions of evolution along with breed development and conservation.
The correlation between saprobity and mitochondrial genes of indicator fish species based on molecular phylogeny
TLDR
The identification of organism species by molecular genetics and the appropriation of a saprobic indicator using bioinformatics method provide a new modern tool to assess the ecological status of water bodies and monitor water bodies.
Phylogenomic analysis of Apoidea sheds new light on the sister group of bees
TLDR
The phylogenetic analyses revealed that within the Apoidea, (eu)social societies evolved exclusively in a single clade that comprises pemphredonine and philanthine wasps as well as bees.
...
1
2
3
4
5
...