Development of genomic simple sequence repeat markers in opium poppy by next-generation sequencing

@article{elik2014DevelopmentOG,
  title={Development of genomic simple sequence repeat markers in opium poppy by next-generation sequencing},
  author={Ibrahim Çelik and Visam Gultekin and Jens Allmer and Sami Doğanlar and Anne Frary},
  journal={Molecular Breeding},
  year={2014},
  volume={34},
  pages={323-334}
}
Opium poppy (Papaver somniferum L.) is an important pharmaceutical crop with very few genetic marker resources. To expand these resources, we sequenced genomic DNA using pyrosequencing technology and examined the DNA sequences for simple sequence repeats (SSRs). A total of 1,244,412 sequence reads were obtained covering 474 Mb. Approximately half of the reads (52 %) were assembled into 166,724 contigs representing 105 Mb of the opium poppy genome. A total of 23,283 non-redundant SSRs were… CONTINUE READING

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