• Corpus ID: 17144365

Development of an Ontology for an Integrated Image Analysis Platform to enable Global Sharing of Microscopy Imaging Data

  title={Development of an Ontology for an Integrated Image Analysis Platform to enable Global Sharing of Microscopy Imaging Data},
  author={Satoshi Kume and Hiroshi Masuya and Yosky Kataoka and Norio Kobayashi},
Imaging data is one of the most important fundamentals in the current life sciences. We aimed to construct an ontology to describe imaging metadata as a data schema of the integrated database for optical and electron microscopy images combined with various bio-entities. To realise this, we applied Resource Description Framework (RDF) to an Open Microscopy Environment (OME) data model, which is the de facto standard to describe optical microscopy images and experimental data. We translated the… 
Development of Semantic Web-Based Imaging Database for Biological Morphome
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This paper proposes a new hybrid, user-assisted approach to semantic indexing of images, Rules-By-Example (RBE), which is based on a combination of RuleML and Query- by-Example, and believes that this approach, in combination with traditional solutions, will enable faster, more flexible, cost-effective and accurate semantic indexed images.
Saturated Reconstruction of a Volume of Neocortex
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  • Nat. Methods., 9(3): 45–53.
  • 2012