Detection and analysis of elusive members of a novel and diverse archaeal community within a thermal spring streamer consortium
@article{Colman2014DetectionAA, title={Detection and analysis of elusive members of a novel and diverse archaeal community within a thermal spring streamer consortium}, author={D. Colman and R. Thomas and K. Maas and C. Takacs-Vesbach}, journal={Extremophiles}, year={2014}, volume={19}, pages={307-313} }
Recent metagenomic analyses of Yellowstone National Park (YNP) thermal spring communities suggested the presence of minor archaeal populations that simultaneous PCR-based assays using traditional ‘universal’ 16S rRNA gene primers failed to detect. Here we use metagenomics to identify PCR primers effective at detecting elusive members of the Archaea, assess their efficacy, and describe the diverse and novel archaeal community from a circum-neutral thermal spring from the Bechler region of YNP… CONTINUE READING
11 Citations
Microbial community analysis of pH 4 thermal springs in Yellowstone National Park
- Biology, Medicine
- Extremophiles
- 2016
- 21
Genomic Comparison of Two Family-Level Groups of the Uncultivated NAG1 Archaeal Lineage from Chemically and Geographically Disparate Hot Springs
- Biology, Medicine
- Front. Microbiol.
- 2017
- 3
- Highly Influenced
- PDF
Comparative Analysis of Microbial Diversity Across Temperature Gradients in Hot Springs From Yellowstone and Iceland
- Environmental Science, Medicine
- Frontiers in Microbiology
- 2020
- PDF
The impact of temperature, pH and environmental heterogeneity on prokaryotic diversity in Yellowstone National Park thermal springs
- Environmental Science
- 2015
- 1
So close, so different: geothermal flux shapes divergent soil microbial communities at neighbouring sites.
- Biology, Medicine
- Geobiology
- 2016
- 20
Phylogenomic analysis of novel Diaforarchaea is consistent with sulfite but not sulfate reduction in volcanic environments on early Earth
- Biology, Medicine
- The ISME Journal
- 2020
- 3
- PDF
Continental smokers couple mantle degassing and distinctive microbiology within continents
- Geology
- 2016
- 20
- PDF
Microbial Shifts Following Five Years of Cover Cropping and Tillage Practices in Fertile Agroecosystems
- Biology, Medicine
- Microorganisms
- 2020
- PDF
Long-term N fertilization imbalances potential N acquisition and transformations by soil microbes.
- Biology, Medicine
- The Science of the total environment
- 2019
- 6
References
SHOWING 1-10 OF 37 REFERENCES
Remarkable archaeal diversity detected in a Yellowstone National Park hot spring environment.
- Biology, Medicine
- Proceedings of the National Academy of Sciences of the United States of America
- 1994
- 762
- Highly Influential
- PDF
A molecular view of archaeal diversity in marine and terrestrial hot water environments
- Biology
- 1999
- 127
- Highly Influential
- PDF
Geoarchaeota: a new candidate phylum in the Archaea from high-temperature acidic iron mats in Yellowstone National Park
- Biology, Medicine
- The ISME Journal
- 2013
- 83
The YNP Metagenome Project: Environmental Parameters Responsible for Microbial Distribution in the Yellowstone Geothermal Ecosystem
- Biology, Medicine
- Front. Microbiol.
- 2013
- 118
- PDF
Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
- Biology, Medicine
- Front. Microbiol.
- 2013
- 60
- PDF
Archaea in coastal marine environments.
- Biology, Medicine
- Proceedings of the National Academy of Sciences of the United States of America
- 1992
- 2,575
- PDF
Metagenomes from High-Temperature Chemotrophic Systems Reveal Geochemical Controls on Microbial Community Structure and Function
- Chemistry, Medicine
- PloS one
- 2010
- 165
- PDF
Review and re-analysis of domain-specific 16S primers.
- Biology, Medicine
- Journal of microbiological methods
- 2003
- 1,524
- PDF
Target Region Selection Is a Critical Determinant of Community Fingerprints Generated by 16S Pyrosequencing
- Biology, Medicine
- PloS one
- 2011
- 202
- PDF