Design and Analysis of 8-bit Smith Waterman based DNA Sequence Alignment Accelerator's Core on ASIC Design Flow

@article{Halim2010DesignAA,
  title={Design and Analysis of 8-bit Smith Waterman based DNA Sequence Alignment Accelerator's Core on ASIC Design Flow},
  author={A. K. Abdul Halim and Z. Abd Majid and M. A. Mansor and S. A. M. Al Junid and S. Mohamed and N. Khairudin and Ahmad Ihsan Mohd Yassin and M. F. M. Idros and S. L. Mohd Hassan},
  journal={2010 Fourth UKSim European Symposium on Computer Modeling and Simulation},
  year={2010},
  pages={126-131}
}
This paper present the design and analysis of 8-bit Smith Waterman (SW) based DNA sequence alignment accelerator’s core on ASIC design flow. The objective of the project is to construct and analyse the core module that can perform the Smith Waterman algorithm’s operations, which are comparing, scoring and back tracing, using the technique used in [1,2] on… CONTINUE READING