De novo secondary structure motif discovery using RNAProfile.


RNA secondary structure plays critical roles in several biological processes. For example, many trans-acting noncoding RNA genes and cis-acting RNA regulatory elements present functional motifs, conserved both in structure and sequence, that can be hardly detected by primary sequence analysis alone. We describe here how conserved secondary structure motifs… (More)
DOI: 10.1007/978-1-4939-2291-8_4


Cite this paper

@article{Zambelli2015DeNS, title={De novo secondary structure motif discovery using RNAProfile.}, author={Federico Zambelli and Giulio Pavesi}, journal={Methods in molecular biology}, year={2015}, volume={1269}, pages={49-62} }