De novo assembly and characterization of the root transcriptome of Aegilops variabilis during an interaction with the cereal cyst nematode

@article{Xu2011DeNA,
  title={De novo assembly and characterization of the root transcriptome of Aegilops variabilis during an interaction with the cereal cyst nematode},
  author={De-Lin Xu and H. Long and Junjun Liang and J. Zhang and X. Chen and Jing-Liang Li and Z. Pan and G. Deng and Mao-qun Yu},
  journal={BMC Genomics},
  year={2011},
  volume={13},
  pages={133 - 133}
}
BackgroundAegilops variabilis No.1 is highly resistant to cereal cyst nematode (CCN). However, a lack of genomic information has restricted studies on CCN resistance genes in Ae. variabilis and has limited genetic applications in wheat breeding.ResultsUsing RNA-Seq technology, we generated a root transcriptome at a sequencing depth of 4.69 gigabases of Ae. variabilis No. 1 from a pooled RNA sample. The sample contained equal amounts of RNA extracted from CCN-infected and untreated control… Expand
Large-scale identification of wheat genes resistant to cereal cyst nematode Heterodera avenae using comparative transcriptomic analysis
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