Data quality aware analysis of differential expression in RNA-seq with NOISeq R/Bioc package

  title={Data quality aware analysis of differential expression in RNA-seq with NOISeq R/Bioc package},
  author={Sonia Tarazona and Pedro Furi{\'o}-Tar{\'i} and David Turr{\`a} and Antonio Di Pietro and Mar{\'i}a Jos{\'e} Nueda and Alberto Ferrer and Ana Conesa},
  booktitle={Nucleic acids research},
As the use of RNA-seq has popularized, there is an increasing consciousness of the importance of experimental design, bias removal, accurate quantification and control of false positives for proper data analysis. We introduce the NOISeq R-package for quality control and analysis of count data. We show how the available diagnostic tools can be used to monitor quality issues, make pre-processing decisions and improve analysis. We demonstrate that the non-parametric NOISeqBIO efficiently controls… CONTINUE READING
Highly Cited
This paper has 73 citations. REVIEW CITATIONS
Recent Discussions
This paper has been referenced on Twitter 23 times over the past 90 days. VIEW TWEETS

From This Paper

Figures, tables, results, connections, and topics extracted from this paper.
41 Extracted Citations
59 Extracted References
Similar Papers

Citing Papers

Publications influenced by this paper.
Showing 1-10 of 41 extracted citations

73 Citations

Citations per Year
Semantic Scholar estimates that this publication has 73 citations based on the available data.

See our FAQ for additional information.

Referenced Papers

Publications referenced by this paper.
Showing 1-10 of 59 references

Phenotypic , genomic , transcriptomic and proteomic changes in Bacillus cereus after a short - term space flight

  • L. Su, L. Zhou, +6 authors Y. Guo
  • Adv . Space Res .
  • 2014

Similar Papers

Loading similar papers…