Dali server: conservation mapping in 3D

@inproceedings{Holm2010DaliSC,
  title={Dali server: conservation mapping in 3D},
  author={Liisa Holm and P{\"a}ivi Rosenstr{\"o}m},
  booktitle={Nucleic acids research},
  year={2010}
}
Our web site (http://ekhidna.biocenter.helsinki.fi/dali_server) runs the Dali program for protein structure comparison. The web site consists of three parts: (i) the Dali server compares newly solved structures against structures in the Protein Data Bank (PDB), (ii) the Dali database allows browsing precomputed structural neighbourhoods and (iii) the pairwise comparison generates suboptimal alignments for a pair of structures. Each part has its own query form and a common format for the results… CONTINUE READING
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