DAGchainer: a tool for mining segmental genome duplications and synteny


SUMMARY Given the positions of protein-coding genes along genomic sequence and probability values for protein alignments between genes, DAGchainer identifies chains of gene pairs sharing conserved order between genomic regions, by identifying paths through a directed acyclic graph (DAG). These chains of collinear gene pairs can represent segmentally… (More)
DOI: 10.1093/bioinformatics/bth397


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