Cooperative Dynamics in Bidirectional Transport on Flexible Lattice
@article{Jindal2020CooperativeDI, title={Cooperative Dynamics in Bidirectional Transport on Flexible Lattice}, author={Akriti Jindal and Atul Kumar Verma and Arvind Kumar Gupta}, journal={Journal of Statistical Physics}, year={2020}, volume={182}, pages={1-19} }
Several theoretical models based on totally asymmetric simple exclusion process (TASEP) have been extensively utilized to study various non-equilibrium transport phenomena. Inspired by the the role of microtubule-transported vesicles in intracellular transport, we propose a generalized TASEP model, where two distinct particles are directed to hop stochastically in opposite directions on a flexible lattice immersed in a three dimensional pool of diffusing particles. We investigate the interplay…
4 Citations
Modelling the effect of ribosome mobility on the rate of protein synthesis
- BiologyThe European physical journal. E, Soft matter
- 2021
It is concluded that diffusion is not a rate limiting factor in translation initiation because diffusion is fast enough in biological cells.
Role of extended coupling in bidirectional transport system.
- PhysicsPhysical review. E
- 2022
Motivated by vehicular traffic phenomena, we study a bidirectional two-lane open totally asymmetric simple exclusion process with extended symmetric coupling conditions in the presence of Langmuir…
Effect of local dissociation on symmetry breaking in exclusion model constituted by bridge lane and input-output TASEPs
- PhysicsChaos, Solitons & Fractals
- 2021
References
SHOWING 1-10 OF 52 REFERENCES
Mechanics of Motor Proteins and the Cytoskeleton
- Biology, Engineering
- 2001
The Motility Models: From Crossbridges to Motion chapter describes the building blocks of the Cytoskeleton and some of the mechanisms used in its manufacture are described.
An Introduction to Green's Functions
- Mathematics
- 1969
Abstract : The report is an introduction to Green's functions intended for workers in acoustics but also suitable for general purposes. The first chapter reviews the properties of the various types…
Physical Review E 99
- 052409
- 2019
Journal of statistical physics 80
- 69
- 1995
Stochastic transport on flexible lattice under limited resources
- PhysicsJournal of Statistical Mechanics: Theory and Experiment
- 2019
Many theoretical models have tried to study the biological transport systems with the unbending paths in the framework of totally asymmetric simple exclusion processes. However, in most cases, these…
Phase segregation and spontaneous symmetry breaking in a bidirectional two-channel non-conserving model with narrow entrances
- Physics
- 2017
Motivated by connections between the inputs and outputs of several transport mechanisms and multi-species functionalities, we studied an open system of a two-species totally asymmetric simple…