Constructing String Graphs in External Memory

  title={Constructing String Graphs in External Memory},
  author={P. Bonizzoni and G. D. Vedova and Yuri Pirola and M. Previtali and R. Rizzi},
  • P. Bonizzoni, G. D. Vedova, +2 authors R. Rizzi
  • Published in WABI 2014
  • Computer Science, Biology
  • In this paper we present an efficient external memory algorithm to compute the string graph from a collection of reads, which is a fundamental data representation used for sequence assembly. 
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