Comprehensive analysis of a multidimensional liquid chromatography mass spectrometry dataset acquired on a quadrupole selecting, quadrupole collision cell, time-of-flight mass spectrometer: II. New developments in Protein Prospector allow for reliable and comprehensive automatic analysis of large datasets.

Abstract

A thorough analysis of the protein interaction partners of the yeast GTPase Gsp1p was carried out by a multidimensional chromatography strategy of strong cation exchange fractionation of peptides followed by reverse phase LC-ESI-MSMS using a QSTAR instrument. This dataset was then analyzed using the latest developmental version of Protein Prospector. The… (More)

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@article{Chalkley2005ComprehensiveAO, title={Comprehensive analysis of a multidimensional liquid chromatography mass spectrometry dataset acquired on a quadrupole selecting, quadrupole collision cell, time-of-flight mass spectrometer: II. New developments in Protein Prospector allow for reliable and comprehensive automatic analysis of large datasets.}, author={Robert J. Chalkley and Peter R. Baker and Lan Huang and Kirk C Hansen and Nadia P.C. Allen and Michael F. Rexach and Alma L. Burlingame}, journal={Molecular & cellular proteomics : MCP}, year={2005}, volume={4 8}, pages={1194-204} }