Complete mitochondrial genome of Schizopygopsis malacanthus (Teleostei: Cypriniformes: Cyprinidae)

@article{Zeng2016CompleteMG,
  title={Complete mitochondrial genome of Schizopygopsis malacanthus (Teleostei: Cypriniformes: Cyprinidae)},
  author={Yuantong Zeng and Yong-bo Chen and Bao-zhu Pan and Da-wen Zhang},
  journal={Mitochondrial DNA Part A},
  year={2016},
  volume={27},
  pages={1405 - 1406}
}
Abstract The complete mitochondrial genome of Schizopygopsis malacanthus is a circular molecule of 16,677 bp in size, containing 13 protein-coding genes, 22 transfer RNA (tRNA) genes, 2 ribosomal RNA (rRNA) genes, and 2 main non-coding regions (the control region and the origin of the light strand replication). Most of the genes are encoded on the heavy strand, except for ND6 and eight tRNAs. The control region is 938 bp in length and located between the tRNAPro and tRNAPhe genes, some typical… 
View on Taylor & Francis
ncbi.nlm.nih.gov

References

SHOWING 1-10 OF 14 REFERENCES

Complete mitochondrial genome of the stone loach, Triplophysa stoliczkae (Teleostei: Cypriniformes: Balitoridae)

The alignment of the Triplophysa species control regions exhibited high genetic variability and rich A+T content.

Mitochondrial genome of the Shorthead catfish (Pelteobagrus eupogon)

The complete mitochondrial genome of Shorthead catfish (Pelteobagrus eupogon) was obtained by DNA sequencing based on the PCR fragments, and molecular data here presented provide a useful toll for evolutionary as well as population genetic studied.

Organization of the Mitochondrial Genome of a Deep-Sea Fish, Gonostoma gracile (Teleostei: Stomiiformes): First Example of Transfer RNA Gene Rearrangements in Bony Fishes

The complete nucleotide sequence of the mitochondrial genome for a deep-sea fish, Gonostoma gracile, was determined and two steps of tandem duplication of gene regions, each followed by deletions of genes, can be invoked as mechanisms generating tRNA gene rearrangements in a bony fish mitochondrial genome.

Mitochondrial genome of the shorthead catfish (Pelteobagrus eupogon): structure, phylogeny, and intraspecific variation.

It is concluded that this species appears to be closely related to the Amblycipitidae, the most basal extant lineage within the Siluriformes, while the Bagridae appeared as the sister group of Cranoglanididae and Pangasiidae.

The complete mitochondrial genome of the large yellow croaker, Larimichthys crocea (Perciformes, Sciaenidae): unusual features of its control region and the phylogenetic position of the Sciaenidae.

The complete mitochondrial genome of the small yellow croaker and partitioned Bayesian analysis of Sciaenidae fish phylogeny

To understand the phylogenetic position of Larimichthys polyactis within the family Sciaenidae and the phylogeny of this family, the organization of the mitochondrial genome of small yellow croaker was determined herein and was found to be most closely related to Collichthy niveatus.

Structure of the mitochondrial DNA control region of the sinipercine fishes and their phylogenetic relationship.

Taxonomic implications from phylogenetic relationships of subspecies of Schizopygopsis malacanthus (Pisces: Cyprinidae) based on sequence analysis of cytochrome b and mitochondrial DNA control region

Phylogenetic analysis indicated that the three subspecies of Schizopygopsis malacanthus did not cluster as one monophyletic group; S. m.

Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics

It is proposed that mitochondrial tRNAs may be useful in resolving deep branches in animal phylogenies with divergences that occurred some hundreds of Myr ago and designed a set of primers with which mtDNA fragments encompassing clustered tRNA genes were successfully amplified from various vertebrates by the polymerase chain reaction.

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

We describe a program, tRNAscan-SE, which identifies 99-100% of transfer RNA genes in DNA sequence while giving less than one false positive per 15 gigabases. Two previously described tRNA detection…