Comparative transcriptome analysis of Nile tilapia (Oreochromis niloticus) in response to alkalinity stress.

  title={Comparative transcriptome analysis of Nile tilapia (Oreochromis niloticus) in response to alkalinity stress.},
  author={Y. Zhao and J. Wang and J. Thammaratsuntorn and J. W. Wu and J. Wei and Y. Wang and J. Xu and J. Zhao},
  journal={Genetics and molecular research : GMR},
  volume={14 4},
  • Y. Zhao, J. Wang, +5 authors J. Zhao
  • Published 2015
  • Biology, Medicine
  • Genetics and molecular research : GMR
  • To identify genes of potential importance to alkalinity tolerance, RNA sequencing (RNA-Seq) was performed to survey gill transcriptome profiles from freshwater (FW) and alkaline water (AW) exposed Nile tilapia (Oreochromis niloticus). A total of 22,724,036 (AW)/16,461,040 (FW) single-end reads were generated in which 20,304,348 (AW)/14,681,290 (FW) reads (90.0/89.72%) were aligned to the reference genome. Differential expression analysis revealed 302 up-regulated and 193 down-regulated genes… CONTINUE READING
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