Comparative genomics of Vibrio campbellii strains and core species of the Vibrio Harveyi clade

@article{Ke2017ComparativeGO,
  title={Comparative genomics of Vibrio campbellii strains and core species of the Vibrio Harveyi clade},
  author={Huei-Mien Ke and Anuphap Prachumwat and Chun-Ping Yu and Yi-Ting Yang and Sutitcha Promsri and Kuan-Fu Liu and Chukwu Lo and Mei-Yeh Jade Lu and Mei-Chin Lai and Isheng. J. Tsai and Wen-Hsiung Li},
  journal={Scientific Reports},
  year={2017},
  volume={7}
}
The core of the Vibrio Harveyi clade contains V. harveyi, V. campbellii, V. owensii, V. jasicida, and V. rotiferianus. They are well recognized aquatic animal pathogens, but misclassification has been common due to similarities in their rDNA sequences and phenotypes. To better understand their evolutionary relationships and functional features, we sequenced a shrimp pathogen strain V. harveyi 1114GL, reclassified it as V. campbellii and compared this and 47 other sequenced Vibrio genomes in the… 
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27 Citations
Background Citations
7
Methods Citations
1
Results Citations
2

27 Citations

Comparative Genomic Analysis of Vibrio diabolicus and Six Taxonomic Synonyms: A First Look at the Distribution and Diversity of the Expanded Species
TLDR
This discovery expands the V. diabolicus species and makes available six additional genomes for comparative genomic analyses, suggesting that the distribution and diversity of this species mirrors that of other Harveyi clade species, which are notable for their ubiquity and diversity.
Phylogenetic Relationship Among Brackishwater Vibrio Species
TLDR
Study reveals that the species identification based on whole genome-based estimates or genome-wide variants are more precise than the ones done with single or subset of genes.
Amphi-enterobactin commonly produced among Vibrio campbellii and Vibrio harveyi strains can be taken up by a novel outer membrane protein FapA that also can transport canonical Fe(III)-enterobactin
TLDR
Results suggest the possibility that amphi-enterobactin is a native siderophore of V. campbellii and V. harveyi, while the anguibactin system has been acquired by V.campbellii during evolution.
A Novel Vibriophage vB_VcaS_HC Containing Lysogeny-Related Gene Has Strong Lytic Ability against Pathogenic Bacteria
TLDR
This study represents the first comprehensive characterization of a lytic V.campbellii phage and indicates that it is a promising candidate for the treatment of V. campbellii infections.
Genomic Analysis Reveals Adaptation of Vibrio campbellii to the Hadal Ocean
TLDR
The data suggest that an increase in genes related to antibiotic resistance, degradation of macromolecular and refractory substrates, and utilization of rare ions is related to the adaptation of V. campbellii strains to adapt to hadal environments.
Genomic identification and characterization of co-occurring Harveyi clade species following a vibriosis outbreak in Pacific white shrimp, Penaeus (litopenaeus) vannamei
First report of isolation and complete genome of Vibrio rotiferianus strain SSVR1601 from cage-cultured black rockfish (Sebastes schlegelii) associated with skin ulcer.
TLDR
The phylogenetic analysis revealed SSVR1601 to be most closely related to V. rotiferianus strains CAIM577 and B64D1, and factors responsible for iron uptake and types II, IV and VI secretion systems were detected, which are likely responsible for the pathogenicity of SSVR 1601.
Detection of Vibrio and ten Vibrio species in cage-cultured fish by multiplex polymerase chain reaction using house-keeping genes
Pathogenicity of a Vibrio owensii strain isolated from Fenneropenaeus chinensis carrying pirAB genes and causing AHPND
Vibrio and major commercially important vibriosis diseases in decapod crustaceans.
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