Classification of Non-Coding RNA Using Graph Representations of Secondary Structure

  title={Classification of Non-Coding RNA Using Graph Representations of Secondary Structure},
  author={Yan Karklin and Richard F. Meraz and Stephen R. Holbrook},
  journal={Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing},
Some genes produce transcripts that function directly in regulatory, catalytic, or structural roles in the cell. These non-coding RNAs are prevalent in all living organisms, and methods that aid the understanding of their functional roles are essential. RNA secondary structure, the pattern of base-pairing, contains the critical information for determining the three dimensional structure and function of the molecule. In this work we examine whether the basic geometric and topological properties… CONTINUE READING
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