Cis-regulatory element based targeted gene finding: genome-wide identification of abscisic acid- and abiotic stress-responsive genes in Arabidopsis thaliana

Abstract

MOTIVATION A fundamental problem of computational genomics is identifying the genes that respond to certain endogenous cues and environmental stimuli. This problem can be referred to as targeted gene finding. Since gene regulation is mainly determined by the binding of transcription factors and cis-regulatory DNA sequences, most existing gene annotation… (More)
DOI: 10.1093/bioinformatics/bti490

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@article{Zhang2005CisregulatoryEB, title={Cis-regulatory element based targeted gene finding: genome-wide identification of abscisic acid- and abiotic stress-responsive genes in Arabidopsis thaliana}, author={Weixiong Zhang and Jianhua Ruan and Tuan-hua David Ho and Youngsook You and Taotao Yu and Ralph S. Quatrano}, journal={Bioinformatics}, year={2005}, volume={21 14}, pages={3074-81} }