Characterization of the nearly complete mitochondrial genome of a Chinese endemic stonefly species, Caroperla siveci (Plecoptera: Perlidae)

@article{Cao2019CharacterizationOT,
  title={Characterization of the nearly complete mitochondrial genome of a Chinese endemic stonefly species, Caroperla siveci (Plecoptera: Perlidae)},
  author={Jinjun Cao and Y. Wang and Ni Li and Weihai Li and Xiling Chen},
  journal={Mitochondrial DNA Part B},
  year={2019},
  volume={4},
  pages={553 - 554}
}
Abstract The stonefly Caroperla Siveci, an unusual and endemic new species, only distributed to the Wuyi Mountain, Fujian Province, China. Here, we sequenced and determined the complete mitochondrial (mt) genome of C. Siveci representing the genus Caroperla for the first time. The total genome size is 15,353 bp in length. The nucleotide composition is A (35.2%), T (32.3%), C (20.5%), and G (11.9%). Mostly PCGs use the typical start codon ATN, except ND1, ND2, and ND5, which start with TTG, GTG… Expand
The complete mitochondrial genome of a Chinese endemic stonefly species, Sinacroneuria dabieshana (Plecoptera: Perlidae)
TLDR
The Bayesian (BI) and maximum-likelihood (ML) trees both showed that S. dabieshana and Acroneuria hainana are the sister group. Expand
The complete mitochondrial genome of a stonefly species, Etrocorema hochii (Plecoptera: Pelidae)
TLDR
Phylogenetic analyses showed that E. hochii is closely related to the clade (Togoperla + Kamimuria), which is widely accepted view, and used this new nucleotide information under Bayesian and maximum-likelihood analyses to explore the relationships of Pelidae. Expand
The complete mitochondrial genome analysis of the stonefly, Flavoperla sp. (Plecoptera: Perlidae)
TLDR
The phylogenetic tree by maximum likelihood (ML) and Bayesian (BI) methods supported that Flavoperla sp. Expand
The mitochondrial genome analysis of a stonefly, Niponiella limbatella (Plecoptera: Perlidae)
TLDR
The phylogenetic relationships based on Bayesian (BI) and maximum-likelihood (ML) methods showed that N. limbatella is closely related to Caroperla siveci, which is in accordance with the traditional morphological classification. Expand
The characterization of the mitochondrial genome of Calineuria stigmatica (Plecoptera: Perlidae)
TLDR
Based on 13 PCGs and two rRNAs using the Bayesian (BI) method supported that C. stigmatica was closely grouped with four other Acroneuriinae species, and provides basic data for further study of phylogeny in Plecoptera. Expand
The complete mitochondrial genome of a stonefly species, Suwallia bimaculata (Plecoptera: Chloroperlidae)
TLDR
Phylogenetic analysis showed that S. bimaculata was the sister group to Suwallia teleckojensis and the clade Su wallia was closely to four perlodid species, and more chloroperlid data was needed for further study of phylogeny in Chloroperlidae. Expand
Characterization of the complete mitochondrial genome of a stonefly, Perlesta teaysia (Plecoptera: Perlidae)
TLDR
The complete mitochondrial genome of Perlesta teaysia was sequenced, including 37 typical genes and a control region, and Phylogenetic analysis suggested that P. teayia was a sister group to Calineuria stigmatica. Expand
The mitochondrial genome analysis of Flavoperla hatakeyamae (Plecoptera: Perlidae)
TLDR
The genus Flavoperla and Niponiella were gathered into one branch and the species of Perlinae were clustered in one clade using Bayesian (BI) and maximum-likelihood (ML) methods. Expand

References

SHOWING 1-10 OF 14 REFERENCES
The complete mitochondrial genome of the styloperlid stonefly species Styloperla spinicercia Wu (Insecta: Plecoptera) with family-level phylogenetic analyses of the Pteronarcyoidea.
TLDR
Phylogenetic analyses using both Bayesian (BI) and Maximum Likelihood (ML) methods support the previous hypotheses regarding family level relationships within the Pteronarcyoidea. Expand
Comparison of two complete mitochondrial genomes from Perlodidae (Plecoptera: Perloidea) and the family-level phylogenetic implications of Perloidea.
TLDR
Results show that genome organization, base composition, codon usage and non-coding and overlapping regions, the sequences of mitochondrial transcription termination factor (DmTTF) and structural elements in control region were conserved in Perlodidae, and Phylogenetic implications supported that Chloroperlidae is a sister group to Perlod families. Expand
Mitochondrial phylogenomics of Hemiptera reveals adaptive innovations driving the diversification of true bugs
TLDR
The phylogeny and evolutionary history of Hemiptera is elucidated and Ancestral character state reconstruction and divergence time estimation suggest that the success of true bugs (Heteroptera) is probably due to angiosperm coevolution, but key adaptive innovations facilitated multiple independent shifts among diverse feeding habits and multiple independent colonizations of aquatic habitats. Expand
Compositional heterogeneity in true bug mitochondrial phylogenomics.
TLDR
This study shows the power of the site-heterogeneous mixture models for resolving phylogenetic relationships with Heteroptera and provides one more case showing that model adequacy is critical for accurate tree reconstruction in mitochondrial phylogenomics. Expand
A new species report of Caroperla Kohno, 1946 (Plecoptera: Perlidae) from China
A brief taxonomic synopsis of the genus Caroperla Kohno, 1946 is presented and its further generic delimitation is defined along with a new species, C. siveci sp. n. from the Wuyishan Mountain ofExpand
CAROPERLA LONGISETA (PLECOPTERA: PERLIDAE), A NEW STONEFLY SPECIES FROM THAILAND
TLDR
The new species is compared to C. pacifica Kohno, the only previously known member of the genus, and is described from adult and larval specimens collected in Chiang Mai Province, Thailand. Expand
Plecoptera species file online; [accessed 2018 Nov 3
  • http://Plecoptera.SpeciesFile.org.
  • 2018
Synopsis of the world genera of Perlinae (Plecoptera: Perlidae)
  • Scopolia. 16:1–66.
  • 1988
...
1
2
...