COMBINABLE COMPONENT CONSENSUS

@article{Bremer1990COMBINABLECC,
  title={COMBINABLE COMPONENT CONSENSUS},
  author={K{\aa}re Bremer},
  journal={Cladistics},
  year={1990},
  volume={6}
}
  • K. Bremer
  • Published 1 December 1990
  • Medicine, Biology
  • Cladistics
Improved Algorithms for Constructing Consensus Trees
TLDR
New deterministic algorithms for constructing consensus trees that are faster than all the previously known ones are presented, and are optimal since the input size is Ω(nk).
AFLPs RESOLVE PHYLOGENY AND REVEAL MITOCHONDRIAL INTROGRESSION WITHIN A SPECIES FLOCK OF AFRICAN ELECTRIC FISH (MORMYROIDEA: TELEOSTEI)
TLDR
Mapping the two forms of electric organ found in this group onto the AFLP tree suggests that posteriorly innervated electrocytes with nonpenetrating stalks have independently evolved from anteriorlyinnervated, penetrating-stalk electrocyte at least three times.
Algorithms in Bioinformatics
TLDR
A new method and a preliminary system is presented that directly incorporates inter-dependencies among locations into the multiple-location-prediction process, using a collection of Bayesian network classifiers and results are significantly higher than those obtained by classifiers that do not use inter- dependency.
Statistical approaches to phylogenetic networks, recombination and testing of incongruence
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Is there a justification for differential a priori weighting in coding sequences? A case study from rbcL and Apocynaceae s.l.
TLDR
It is shown there is no significant difference in performance between parsimony-informative sites constrained by function in the enzyme, and sites that are not, and the substitutions in third-codon position performed significantly better than those in first and second.
Phylogenetic frameworks: towards a firmer foundation for the comparative approach
TLDR
It is concluded that taxonomic congruence is preferable to character Congruence for estimating accuracy of phylogenetic hypotheses, and the combinable components approach, when preceded by application of rigorous statistical manipulations, is most appropriate.
A MULTILOCUS GENEALOGICAL APPROACH TO PHYLOGENETIC SPECIES RECOGNITION IN THE MODEL EUKARYOTE NEUROSPORA
TLDR
Not only were phylogenetic criteria superior to traditional reproductive compatibility criteria in revealing the full species diversity of Neurospora, but also significant phylogenetic subdivisions were detected within some species.
New clades of euthyneuran gastropods (Mollusca) from 28S rRNA sequences.
TLDR
Morphological characters which support the new clades obtained here are discussed and first molecular confirmation of monophylies of Hygrophila, including Chilina, Acteonoidea, and Sacoglossa, which include both shell-bearing species and slugs are discussed.
Measuring Topological Congruence by Extending Character Techniques
A measure of topological congruence which is an extension of the Mickevich–Farris character incongruence metric (i.e., ILD; Mickevich and Farris, 1981) is proposed. Group inclusion characters (1 =
Measuring Topological Congruence by Extending Character Techniques
A measure of topological congruence which is an extension of the Mickevich–Farris character incongruence metric (i.e., ILD; Mickevich and Farris, 1981) is proposed. Group inclusion characters (1 =
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References

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This paper is a commentary on Zandee and Roos’ (1987; see also Humphries et al., 1988) recent attempt to develop quantitative methods of analysis for cladistic biogeography. Although I share their
On the Information Content of Classifications
Abstract— The best fit estimate of the retrospective information content of a classification is argued to be the proportion of the maximal sum of informative subgroups to which each included taxon is
Choosing Among Multiple Equally Parsimonious Cladograms
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Choosing aniong multiple equally parsimonious cladograms . Cladistics FARRIS . , J S . 1 ! ) 88 . Hetinig 86 . \ ’ vision 1 . 5
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CONSENSUS CLADOGRAMS AND GENERAL CLASSIFICATIONS
  • M. Miyamoto
  • Medicine, Biology
    Cladistics : the international journal of the Willi Hennig Society
  • 1985
A View of Some Consensus Methods for Trees
TLDR
The study of consensus is important, assuming most participants of this conference are aware that the topic has recently been drawing considerable attention.
Testing the theory of evolution by comparing phylogenetic trees constructed from five different protein sequences
TLDR
This work has tested the prediction that similar phylogenetic trees should be obtained from different sets of character data using sequence data for 5 proteins from 11 species and found that this prediction is consistent with the theory of evolution.
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Consensusn-trees
TLDR
A method is presented, called majority rule, which can be used to define a consensus of these classifications, and some mathematical properties of this consensus tree are discussed.
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