CHSalign: A Web Server That Builds upon Junction-Explorer and RNAJAG for Pairwise Alignment of RNA Secondary Structures with Coaxial Helical Stacking

Abstract

RNA junctions are important structural elements of RNA molecules. They are formed when three or more helices come together in three-dimensional space. Recent studies have focused on the annotation and prediction of coaxial helical stacking (CHS) motifs within junctions. Here we exploit such predictions to develop an efficient alignment tool to handle RNA… (More)
DOI: 10.1371/journal.pone.0147097

Topics

3 Figures and Tables

Cite this paper

@inproceedings{Hua2016CHSalignAW, title={CHSalign: A Web Server That Builds upon Junction-Explorer and RNAJAG for Pairwise Alignment of RNA Secondary Structures with Coaxial Helical Stacking}, author={Lei Hua and Yang Song and Namhee Kim and Christian Laing and Jason Tsong-Li Wang and Tamar Schlick}, booktitle={PloS one}, year={2016} }