CGH-Plotter: MATLAB toolbox for CGH-data analysis

  title={CGH-Plotter: MATLAB toolbox for CGH-data analysis},
  author={Reija Autio and Sampsa Hautaniemi and P{\"a}ivikki Kauraniemi and Olli P. Yli-Harja and Jaakko Astola and Maija Wolf and Anne Kallioniemi},
  volume={19 13},
CGH-Plotter is a MATLAB toolbox with a graphical user interface for the analysis of comparative genomic hybridization (CGH) microarray data. CGH-Plotter provides a tool for rapid visualization of CGH-data according to the locations of the genes along the genome. In addition, the CGH-Plotter identifies regions of amplifications and deletions, using k-means clustering and dynamic programming. The application offers a convenient way to analyze CGH-data and can also be applied for the analysis of… CONTINUE READING