CADLIVE dynamic simulator: direct link of biochemical networks to dynamic models.

@article{Kurata2005CADLIVEDS,
  title={CADLIVE dynamic simulator: direct link of biochemical networks to dynamic models.},
  author={Hiroyuki Kurata and Kouichi Masaki and Yoshiyuki Sumida and Rei Iwasaki},
  journal={Genome research},
  year={2005},
  volume={15 4},
  pages={590-600}
}
We have developed the CADLIVE (Computer-Aided Design of LIVing systEms) Simulator that provided a rule-based automatic way to convert biochemical network maps into dynamic models, which enables simulating their dynamics without going through all of the reactions down to the details of exact kinetic parameters. The simulator supports the biochemical reaction maps that are generated by the previously developed GUI editor. Notice that the part of the GUI editor had been previously published, but… CONTINUE READING
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