Bma: Visual Tool for Modeling and Analyzing Biological Networks

  title={Bma: Visual Tool for Modeling and Analyzing Biological Networks},
  author={David Benque and Sam Bourton and Caitlin Cockerton and Byron Cook and Jasmin Fisher and Samin Ishtiaq and Nir Piterman and Alex S. Taylor and Moshe Y. Vardi},
BioModel Analyzer (bma) is a tool for modeling and analyzing biological networks. Designed with a lightweight graphical user interface, the tool facilitates usage for biologists with no previous knowledge in programming or formal methods. The current implementation analyzes systems to establish stabilization. The results of the analysis— whether they be proofs or counterexamples—are represented visually. This paper describes the approach to modeling used in bma and also notes soon-to-be… CONTINUE READING
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