Biological Dynamics Markup Language (BDML): an open format for representing quantitative biological dynamics data

@article{Kyoda2015BiologicalDM,
  title={Biological Dynamics Markup Language (BDML): an open format for representing quantitative biological dynamics data},
  author={K. Kyoda and Y. Tohsato and K. L. Ho and S. Onami},
  journal={Bioinformatics},
  year={2015},
  volume={31},
  pages={1044 - 1052}
}
Motivation: Recent progress in live-cell imaging and modeling techniques has resulted in generation of a large amount of quantitative data (from experimental measurements and computer simulations) on spatiotemporal dynamics of biological objects such as molecules, cells and organisms. Although many research groups have independently dedicated their efforts to developing software tools for visualizing and analyzing these data, these tools are often not compatible with each other because of… Expand
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