Bayesian QTL analyses using pedigreed families of an outcrossing species, with application to fruit firmness in apple

@article{Bink2014BayesianQA,
  title={Bayesian QTL analyses using pedigreed families of an outcrossing species, with application to fruit firmness in apple},
  author={Marco C. A. M. Bink and Johannes Hendrik Marco Jansen and Madhuri Madduri and Roeland E. Voorrips and C. Durel and Abou Bakari Kouassi and François N. D. Laurens and Federica Mathis and C. Gessler and Davide Gobbin and Fabio Rezzonico and A. Patocchi and Markus Kellerhals and Anastassia Boudichevskaia and Frank Dunemann and Andreas Peil and Anna Nowicka and Barbara Lata and Marta Stankiewicz-Kosyl and K. Jeziorek and E. Pitera and Andrzej Soska and Katarzyna Tomala and Katherine Evans and Felicidad Fern{\'a}ndez-Fern{\'a}ndez and Walter Izquierdo Guerra and Małgorzata U. Korbin and Sabrina Keller and Mariusz Lewandowski and W. Plocharski and K. Rutkowski and Edward Żurawicz and Fabrizio Costa and Silviero Sansavini and Stefano Tartarini and Matteo Komjanc and Daniela Mott and A. Antofie and M. Lateur and Alain Rondia and Luca Gianfranceschi and W. E. Van de Weg},
  journal={Theoretical and Applied Genetics},
  year={2014},
  volume={127},
  pages={1073-1090}
}
Proof of concept of Bayesian integrated QTL analyses across pedigree-related families from breeding programs of an outbreeding species. Results include QTL confidence intervals, individuals’ genotype probabilities and genomic breeding values. Bayesian QTL linkage mapping approaches offer the flexibility to study multiple full sib families with known pedigrees simultaneously. Such a joint analysis increases the probability of detecting these quantitative trait loci (QTL) and provide insight of… CONTINUE READING
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