BOAT: Basic Oligonucleotide Alignment Tool

@inproceedings{Zhao2009BOATBO,
  title={BOAT: Basic Oligonucleotide Alignment Tool},
  author={Shuqi Zhao and Jianxiang Wang and Li Zhang and Jiong-Tang Li and Xiaocheng Gu and Ge Gao and Liping Wei},
  booktitle={BMC Genomics},
  year={2009}
}
Next-generation DNA sequencing technologies generate tens of millions of sequencing reads in one run. These technologies are now widely used in biology research such as in genome-wide identification of polymorphisms, transcription factor binding sites, methylation states, and transcript expression profiles. Mapping the sequencing reads to reference genomes efficiently and effectively is one of the most critical analysis tasks. Although several tools have been developed, their performance… CONTINUE READING