BEDTools: The Swiss-Army Tool for Genome Feature Analysis.

@article{Quinlan2014BEDToolsTS,
  title={BEDTools: The Swiss-Army Tool for Genome Feature Analysis.},
  author={Aaron R. Quinlan},
  journal={Current protocols in bioinformatics},
  year={2014},
  volume={47},
  pages={11.12.1-34}
}
Technological advances have enabled the use of DNA sequencing as a flexible tool to characterize genetic variation and to measure the activity of diverse cellular phenomena such as gene isoform expression and transcription factor binding. Extracting biological insight from the experiments enabled by these advances demands the analysis of large, multi-dimensional datasets. This unit describes the use of the BEDTools toolkit for the exploration of high-throughput genomics datasets. Several… CONTINUE READING
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